課程資訊
課程名稱
化學資訊
CHEMINFORMATICS 
開課學期
95-2 
授課對象
電機資訊學院  生醫電子與資訊學研究所  
授課教師
曾宇鳳 
課號
CSIE5730 
課程識別碼
922EU3500 
班次
 
學分
全/半年
半年 
必/選修
選修 
上課時間
星期三2,3,4(9:10~12:10) 
上課地點
資105 
備註
本課程以英語授課。
總人數上限:60人 
Ceiba 課程網頁
http://ceiba.ntu.edu.tw/952Cheminfo 
課程簡介影片
 
核心能力關聯
核心能力與課程規劃關聯圖
課程大綱
為確保您我的權利,請尊重智慧財產權及不得非法影印
課程概述

The new discipline of cheminformatics covers the application of computer-
assisted methods to chemical problems such as information storage and
retrieval, the prediction of physical, chemical or biological properties of
compounds, spectra simulation, structure elucidation, reaction modeling,
synthesis planning and drug design. This class provides an introduction to the
representation of molecular structures and reactions, data types and
databases/data sources, search methods, methods for data analysis as well as
such applications as structure elucidation, reaction simulation, synthesis
planning and drug design.

Basic chemistry and physics background preferred but not required. Experience
in machine learning, multivariate statistical analysis, and pattern
recognition will be helpful but not required.


Textbook: Cheminformatics, by Johann Gasteiger, Thomas Engel

Publisher: John Wiley & Sons (December 9, 2003) , ISBN-10: 3527306811


 

課程目標
* Basic chemistry for cheminformatics, representation of the chemical
structure, chemical nomenclature, elements, and formulas of compounds to
chemical structure fingerprints
* Chemical data, from 2D to 3D structure, structure comparison
* Chemical reactions,
* Calculation of physical chemical properties of compounds,
* Calculation of structure descriptors
* Methods for data analysis, and applications in computer-aided drug design,
spectra analysis, molecular modeling, simulation


 
課程要求
 
預期每週課後學習時數
 
Office Hours
每週四 15:00~17:00 
指定閱讀
 
參考書目
Textbook: Cheminformatics, by Johann Gasteiger, Thomas Engel, Publisher: John Wiley & Sons (December 9, 2003) , ISBN-10: 3527306811 
評量方式
(僅供參考)
 
No.
項目
百分比
說明
1. 
期中考 
40% 
 
2. 
期末考 
40% 
 
3. 
作業 
0% 
 
4. 
報告 
20% 
 
5. 
出席 
20% 
 
 
課程進度
週次
日期
單元主題
第2週
3/07  Introduction/Chemistry 
第3週
3/14  Representation of Chemical Compounds

 
第4週
3/21  Representation of Chemical Reactions 
第5週
3/28  Data 1 
第6週
4/04  Data 2 
第7週
4/11  Database and Data sources in Chemistry 
第8週
4/18  Database and Data sources in Chemistry 
第9週
4/25  Mid Term 
第10週
5/02  Searching Chemical structures
 
第11週
5/09  Calculation of Physical and Chemical Data 
第12週
5/16  Calculation of Physical and Chemical Data 
第13週
5/23  Calculation of Physical and Chemical Data 
第14週
5/28  Calculation of Structure Descriptors 
第14週
5/30  Calculation of Structure Descriptors 
第15週
6/4  Methods for Data Analysis 
第15週
6/6  Application 
第17週
6/20  Final Exam